Fitness data for PP_4345 in Pseudomonas putida KT2440

Transcriptional regulator, GntR family
SEED: Transcriptional regulator, GntR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
carbon source ferulate (C); with MOPS -1.3 -2.4 compare
carbon source ferulate (C); with MOPS -1.1 -2.8 compare
nitrogen source NAG (N); with MOPS -1.0 -2.0 compare
carbon source D-Glucose (C) -0.9 -2.2 compare
carbon source Acetate Carbon Source (5mM) -0.9 -4.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.8 -2.9 compare
carbon source L-Phenylalanine 5 mM (C) -0.7 -3.3 compare
pH pH 6 -0.7 -3.1 compare
carbon source carbon source 3-O-methyl-glucose 10 mM -0.6 -2.5 compare
carbon source carbon source 4-vinylphenol 0.01 mM -0.6 -2.8 compare
carbon source D-Glucose (C) with 20AA_mix_minus_Leu -0.6 -3.8 compare
carbon source Acetate Carbon Source (20mM) -0.6 -3.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.6 -2.5 compare
carbon source 2,3-Butanediol (C) -0.6 -3.9 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -2.6 compare
carbon source Hydroxy-L-Proline (C) -0.6 -2.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.6 -2.5 compare
phage PUT8 MOI 10 +0.7 +3.0 compare
nitrogen source L-Leucine (N) +0.8 +5.4 compare