Fitness data for PP_4330 in Pseudomonas putida KT2440

putative toxin-related protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
phage P. putida Sci small MOI 0.1 -0.9 -5.4 compare
phage P. putida Sci small MOI 0.1 -0.5 -2.9 compare
nitrogen source 2,6-diaminopimelic (N) -0.4 -2.8 compare
phage P. putida Sci Big MOI 0.1 -0.4 -2.8 compare
stress R2A with Fusaric 240 ug/mL -0.3 -2.3 compare
phage P. putida Missley MOI 0.1 -0.3 -2.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.3 -1.6 compare
carbon source carbon source 3-O-methyl-glucose 50 mM -0.2 -1.7 compare
carbon source D-Glucose (C) -0.2 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.2 -1.7 compare
temperature shift Temperature shift 10_to_25; with MOPS -0.2 -1.6 compare
carbon source carbon source 4-vinylphenol 0.01 mM -0.2 -1.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.2 +1.5 compare
temperature Growth at 10C; with MOPS +0.2 +1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.2 +1.8 compare
carbon source butyrate (C) +0.2 +1.7 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 +0.2 +1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.3 +1.8 compare
carbon source Butyl stearate (C) +0.3 +2.3 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 +0.4 +2.8 compare