Fitness data for PP_4308 in Pseudomonas putida KT2440

Transcriptional regulator, AsnC family
SEED: Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system
KEGG: Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
no stress control Growth with no stress -2.0 -2.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.9 -2.8 compare
pH Growth at pH7 and (C) Trisodium citrate -1.4 -1.4 compare
temperature shift Temperature shift 30_to_25; with MOPS -1.4 -1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -1.4 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.3 -2.0 compare
nitrogen source Ammonium chloride (N) -1.2 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.0 -1.2 compare
pH Growth at pH7 and (C) D-Glucose -1.0 -1.5 compare
nitrogen source NAG (N) -1.0 -2.5 compare
temperature shift Temperature shift 30_to_34; with MOPS -0.9 -2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.9 -1.3 compare
r2a control with 0.2% methanol R2A control with 0.2% methanol -0.9 -1.9 compare
pH Growth at pH9 and (C) Trisodium citrate +0.9 +2.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9 +2.4 compare
nitrogen source D-2-Aminobutyric (N) +1.0 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.1 +2.1 compare
phage P. put South MOI 10 +1.1 +2.4 compare
nitrogen source D-2-Aminobutyric (N) +1.1 +1.5 compare
carbon source ferulate (C); with MOPS +1.3 +2.4 compare