Fitness data for PP_4300 in Pseudomonas putida KT2440

putative hydroxypyruvate reductase
SEED: D-glycerate 2-kinase (EC 2.7.1.-)
KEGG: hydroxypyruvate reductase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source carbon source 3-O-methyl-glucose 10 mM -1.2 -3.5 compare
pH pH 6 -1.0 -4.1 compare
pH pH 9 -0.8 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.7 -1.5 compare
nitrogen source Urea (N) -0.7 -1.9 compare
pH Growth at pH9 and (C) Trisodium citrate -0.6 -2.0 compare
nitrogen source Propandiamine (N) -0.6 -1.8 compare
pH Growth at pH9 and (C) Trisodium citrate -0.6 -2.1 compare
carbon source acetate (C) -0.6 -1.6 compare
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM -0.6 -2.1 compare
nitrogen source 2,6-diaminopimelic (N) -0.6 -1.7 compare
pH pH 8 -0.6 -2.1 compare
nitrogen source nitrite (N) -0.6 -2.3 compare
carbon source Valerolactone (C) -0.5 -2.3 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.5 +2.5 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X +0.6 +2.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.6 +3.0 compare
pH Growth at pH6 and (C) D-Glucose +0.7 +2.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.8 +3.1 compare