Fitness data for PP_4297 in Pseudomonas putida KT2440

glyoxylate carboligase
SEED: Glyoxylate carboligase (EC 4.1.1.47)
KEGG: tartronate-semialdehyde synthase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source carbon source D-Glucose 55.5 mM -0.4 -1.9 compare
nitrogen source no extra (N); with MOPS -0.4 -2.2 compare
pH Growth at pH6 and (C) Trisodium citrate -0.4 -1.9 compare
pH Growth at pH8 and (C) Trisodium citrate -0.4 -2.3 compare
temperature Growth at 30C; with MOPS -0.4 -2.3 compare
nitrogen source Ammonium chloride (N); with MOPS -0.4 -2.0 compare
temperature shift Temperature shift 30_to_25; with MOPS -0.4 -1.8 compare
carbon source Octanoic (C) -0.4 -2.3 compare
pH Growth at pH6 and (C) D-Glucose -0.4 -2.3 compare
pH Growth at pH7 and (C) Trisodium citrate -0.4 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -2.2 compare
carbon source 4-Aminobutyric 10 mM (C) -0.3 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -2.0 compare
carbon source Tween 20 (C) -0.3 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -1.6 compare
pH Growth at pH6 and (C) D-Glucose -0.3 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.3 -2.0 compare
temperature shift Temperature shift 30_to_34; with MOPS -0.3 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.3 +1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.4 +2.1 compare