Fitness data for PP_4287 in Pseudomonas putida KT2440

2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
nitrogen source Adenine (N) -2.9 -4.8 compare
nitrogen source Adenine (N) -2.6 -5.6 compare
nitrogen source D-2-Aminobutyric (N) -1.3 -2.8 compare
nitrogen source DL-2-Aminobutyric (N) -1.0 -4.9 compare
stress R2A with Fusaric 240 ug/mL -0.8 -2.6 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.8 -3.0 compare
nitrogen source DL-2-Aminobutyric (N) -0.7 -2.8 compare
carbon source ferulate (C); with MOPS -0.7 -1.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.7 -1.7 compare
carbon source D-Glucose (C) -0.6 -1.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.6 -2.6 compare
micoeukaryotes Tetrahymena sp., Mixed culture-1 -0.6 -2.0 compare
carbon source Sebacic (C) -0.6 -2.5 compare
dilutelb LB 0.1x with 55.5 mM D-Glucose -0.6 -2.5 compare
pH Valerolactone (C) pH 6.5 -0.6 -2.3 compare
microaerobic m9 microaerobic M9 -0.6 -2.4 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM -0.6 -2.3 compare
carbon source 3-Hydroxypropionate (C) -0.6 -2.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.6 +2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.7 +1.4 compare