Fitness data for PP_4285 in Pseudomonas putida KT2440

5-hydroxyisourate hydrolase
SEED: 5-Hydroxyisourate Hydrolase (HIUase) (EC 3.5.2.17)
KEGG: 5-hydroxyisourate hydrolase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.0)


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group condition fitness t score  
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-tyrosine 5 mM -2.1 -4.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -2.0 -2.8 compare
temperature shift Temperature shift 30_to_21; with MOPS -1.9 -2.6 compare
carbon source ferulate (C); with MOPS -1.8 -3.8 compare
temperature shift Temperature shift 30_to_25; with MOPS -1.8 -3.2 compare
nitrogen source D-2-Aminobutyric (N) -1.7 -2.6 compare
carbon source 3-methyl-1-butanol 0.1 vol% (C) -1.5 -4.3 compare
carbon source L-Phenylalanine 5 mM (C) -1.5 -3.3 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -1.2 -3.7 compare
temperature Growth at 25C -1.1 -2.0 compare
pH Growth at pH8 and (C) D-Glucose -1.1 -3.3 compare
reactor_pregrowth Adaptation in M9 media timecourse 4; day 3 -1.1 -3.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.1 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.1 -2.5 compare
pH Growth at pH7 and (C) Trisodium citrate -1.1 -1.4 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Phenylalanine 5 mM -1.0 -2.4 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.0 -2.7 compare
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v dodecane overlay +1.1 +3.1 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v oleyl alcohol overlay +1.1 +2.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.5 +1.8 compare