Fitness data for PP_4247 in Pseudomonas putida KT2440

Exonuclease
SEED: Inhibitor of the KinA pathway to sporulation, predicted exonuclease

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.9)


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group condition fitness t score  
pH Growth at pH7 and (C) D-Glucose -4.1 -1.1 compare
pH Growth at pH7 and (C) Trisodium citrate -3.8 -1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -3.0 -1.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -2.6 -1.3 compare
stress R2A with Fusaric 120 ug/mL -2.6 -2.3 compare
stress R2A with Fusaric 240 ug/mL -2.6 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -2.5 -1.8 compare
stress Isobutyl alcohol 0.6 vol% -2.4 -2.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -2.4 -1.6 compare
nitrogen source D-2-Aminobutyric (N) -2.3 -0.5 compare
temperature shift Temperature shift 10_to_25; with MOPS -2.2 -1.5 compare
pH Growth at pH8 and (C) Trisodium citrate -2.2 -1.7 compare
phage P. putida PUT 7 MOI 1 -2.1 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -2.1 -1.8 compare
carbon source D-Glucose (C); with MOPS -2.1 -1.6 compare
nitrogen source Urea (N) -2.0 -1.0 compare
nitrogen source nitrate (N) -2.0 -1.6 compare
phage moi 100 Time6-phageFRS -2.0 -2.3 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 -2.0 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.9 +1.3 compare