Fitness data for PP_4212 in Pseudomonas putida KT2440

pyoverdine biosynthesis related protein
SEED: Pyoverdine biosynthesis related protein PvdP

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
pH Growth at pH9 and (C) Trisodium citrate -1.7 -2.3 compare
temperature Growth at 10C; with MOPS -1.4 -4.5 compare
temperature Growth at 30C; with MOPS -1.2 -2.6 compare
carbon source ferulate (C); with MOPS -1.1 -2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -1.1 -2.9 compare
nitrogen source nitrite (N) -1.0 -2.1 compare
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO. -1.0 -2.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.0 -1.7 compare
carbon source 4-Methyl-2-oxopentanoic (C) -1.0 -2.3 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM -1.0 -2.7 compare
stress NaCl stress 250 mM -0.9 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.8 -1.3 compare
stress R2A with Polymyxin B sulfate 0.001 mg/ml -0.8 -2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.8 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.8 -2.3 compare
carbon source Delta-Undecalactone (C) -0.8 -2.6 compare
carbon source 3-methyl-1-butanol 0.25 vol% (C) +0.8 +2.5 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +1.1 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.9 +1.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +1.2 +1.3 compare