Fitness data for PP_4208 in Pseudomonas putida KT2440

RNA polymerase sigma-70 factor, ECF subfamily
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.0)


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group condition fitness t score  
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -3.6 -4.2 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -3.1 -5.1 compare
reactor 40hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 1g/hr dextrose, set to 30% DO. -2.5 -6.9 compare
reactor 40hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 2.15g/hr dextrose, set to 30% DO. -2.3 -5.7 compare
reactor 24hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 1g/hr dextrose, set to 30% DO. -2.3 -4.3 compare
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -2.2 -5.5 compare
reactor 48hr timepoint of 1L M9/1% dextrose DISCONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat set to 10% DO. -2.1 -4.6 compare
reactor_pregrowth Adaptation in M9 media timecourse 3; day 3 -1.7 -6.6 compare
reactor_pregrowth Adaptation in M9 media timecourse 1; day 3 -1.5 -6.3 compare
reactor_pregrowth Adaptation in M9 media timecourse 2; day 3 -1.4 -6.7 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 -1.3 -3.5 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 -1.3 -3.9 compare
phage moi 100 Time6-phageFRS -1.2 -3.8 compare
mixed community Putida_ML5X with Paraburkholderia sabiae T6SS mutant -1.2 -4.5 compare
no phage control Time6-nophage -1.2 -3.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.1 -2.9 compare
mixed community control Putida_ML5X alone -1.1 -4.5 compare
dilutelb LB 0.1x with 55.5 mM D-Glucose -1.1 -4.1 compare
nophagecontrol TIme6-nophage -1.0 -5.0 compare
no phage control Time6-nophage -1.0 -3.3 compare