Fitness data for PP_4196 in Pseudomonas putida KT2440

conserved exported protein of unknown function
SEED: Translation initiation factor 2 (IF-2; GTPase)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.5)


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group condition fitness t score  
carbon source 4-Aminobutyric 10 mM (C) -3.4 -2.5 compare
pH Growth at pH8 and (C) Trisodium citrate -2.8 -2.7 compare
temperature shift Temperature shift 30_to_25; with MOPS -2.6 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -2.5 -2.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -2.3 -2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -2.0 -1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.9 -1.6 compare
pH Growth at pH9 and (C) Trisodium citrate -1.9 -1.6 compare
carbon source D-Glucose (C) with 20AA_mix_minus_Cys -1.9 -2.2 compare
nitrogen source nitrogen source nitrite 1mM -1.9 -2.0 compare
nitrogen source Propiolactam (N) -1.8 -1.2 compare
carbon source D-Glucose (C) -1.8 -1.8 compare
nitrogen source D-2-Aminobutyric (N) -1.8 -1.0 compare
phage P. put South MOI 10 -1.7 -1.1 compare
phage moi 100 Time6-phageFRS -1.7 -2.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -1.6 -1.4 compare
carbon source 3-methyl-1-butanol 0.25 vol% (C) +1.5 +2.6 compare
carbon source ferulate (C); with MOPS +1.5 +2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +1.5 +2.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +1.7 +2.2 compare