Fitness data for PP_4155 in Pseudomonas putida KT2440

putative amine oxidase
SEED: Monoamine oxidase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.0 -2.7 compare
nitrogen source NAG (N); with MOPS -0.6 -1.7 compare
carbon source Tween 20 (C) -0.5 -2.0 compare
stress R2A with Fusaric 240 ug/mL -0.5 -2.3 compare
carbon source D-Glucose (C) with 20AA_mix_minus_Tyr -0.4 -2.7 compare
stress R2A with Fusaric 480 ug/mL -0.4 -2.2 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v dodecane overlay -0.4 -2.2 compare
temperature Growth at 30C; with MOPS -0.4 -1.6 compare
nitrogen source nitrogen source nitrite 0.5mM -0.4 -1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs +0.4 +2.2 compare
nitrogen source Urea (N); with MOPS +0.4 +1.6 compare
mixed community Putida_ML5X with Paraburkholderia sabiae T6SS mutant +0.4 +2.3 compare
carbon source ferulate (C); with MOPS +0.4 +1.7 compare
reactor 24hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 1g/hr dextrose, set to 30% DO. +0.4 +2.1 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.5 +1.6 compare
pH Growth at pH7 and (C) Trisodium citrate +0.5 +2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.5 +1.5 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.6 +2.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.6 +2.4 compare