microcin C transporter - ATP binding subunit
SEED: Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)
KEGG: microcin C transport system ATP-binding protein
Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.1)
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| group | condition | fitness | t score | |
|---|
| supernatant | Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X | -2.4 | -5.1 | compare |
| soil | Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs | -1.7 | -3.4 | compare |
| soil | Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs | -1.5 | -2.5 | compare |
| supernatant | Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X | -1.5 | -3.5 | compare |
| nitrogen source | Ammonium chloride and TNT (N) | -1.5 | -7.2 | compare |
| temperature shift | Temperature shift 10_to_30 | -1.5 | -4.5 | compare |
| supernatant | Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X | -1.3 | -3.2 | compare |
| micoeukaryotes | C.elegans, mixed culture-1 | -1.2 | -2.8 | compare |
| nitrogen source | nitrate (N) | -1.2 | -1.7 | compare |
| nitrogen source | 2,6-diaminopimelic (N) | -1.2 | -3.7 | compare |
| nitrogen source | TNT (N) | -1.2 | -4.0 | compare |
| soil | Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs | -1.2 | -2.0 | compare |
| carbon source | 1,3-Hexanediol (C) | -1.2 | -3.5 | compare |
| reactor | 24hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 1g/hr dextrose, set to 30% DO. | -1.2 | -2.8 | compare |
| in planta | Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days | -1.1 | -2.1 | compare |
| reactor | 40hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 1g/hr dextrose, set to 30% DO. | -1.1 | -3.1 | compare |
| carbon source | Decanoic (C) | +1.2 | +7.0 | compare |
| carbon source | Delta-Decalactone (C) | +1.2 | +5.2 | compare |
| carbon source | Delta-Decalactone (C) | +1.4 | +5.7 | compare |
| carbon source | Delta-Nonalactone (C) | +2.6 | +15.0 | compare |