Fitness data for PP_4137 in Pseudomonas putida KT2440

putative Outer membrane siderophore receptor
SEED: Outer membrane receptor proteins, mostly Fe transport
KEGG: iron complex outermembrane recepter protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
carbon source D-Glucose (C) -0.4 -2.1 compare
phage P. putida South MOI 10 -0.3 -1.7 compare
carbon source 3-methyl-1-butanol (C) -0.3 -2.3 compare
phage P. put South MOI 1 -0.3 -2.0 compare
temperature Growth at 25C -0.3 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -1.9 compare
carbon source Octanoic (C) -0.3 -1.9 compare
phage P. putida South MOI 0.1 -0.3 -1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X -0.2 -1.8 compare
nitrogen source nitrogen source nitrite 1mM -0.2 -1.6 compare
pH Growth at pH9 and (C) Trisodium citrate -0.2 -1.7 compare
stress 1-Pentanol 0.3 vol% +0.3 +2.0 compare
r2a control with 0.2% methanol R2A control with 0.2% methanol +0.3 +2.1 compare
pH pH 7 +0.3 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.3 +1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.3 +2.1 compare
carbon source L-Leucine (C) +0.4 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.4 compare
carbon source Delta-Nonalactone (C) +0.4 +2.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.6 +2.9 compare