Fitness data for PP_4121 in Pseudomonas putida KT2440

NADH-quinone oxidoreductase subunit C/D
SEED: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) / NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3)
KEGG: NADH dehydrogenase I subunit C/D

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 2.7)


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group condition fitness t score  
carbon source Levulinic Acid (C) -4.3 -7.6 compare
carbon source Levulinic Acid (C) -4.0 -8.1 compare
carbon source Vanillin (C) -3.1 -9.1 compare
carbon source 3-methyl-1-butanol (C) -3.1 -6.5 compare
carbon source 4-Methyl-2-oxopentanoic (C) -2.9 -2.0 compare
carbon source L-Lysine (C) -2.9 -5.1 compare
carbon source Delta-Decalactone (C) -2.8 -2.8 compare
carbon source Butyl stearate (C) -2.8 -3.3 compare
stress R2A with Fusaric 480 ug/mL -2.8 -6.4 compare
carbon source 3-methyl-1-butanol (C) -2.7 -6.8 compare
carbon source Delta-Undecalactone (C) -2.7 -4.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -2.7 -4.9 compare
r2a control with 0.2% methanol R2A control with 0.2% methanol -2.7 -7.1 compare
carbon source 4-Methyl-2-oxopentanoic (C) -2.7 -1.9 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 +2.7 +13.4 compare
reactor 24hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 1g/hr dextrose, set to 30% DO. +2.8 +4.1 compare
reactor 48hr timepoint of 1L M9/1% dextrose DISCONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat set to 10% DO. +2.9 +2.0 compare
nitrogen source DL-2-Aminobutyric (N) +3.5 +19.6 compare
micoeukaryotes C.elegans, mixed culture-2 +3.8 +23.0 compare
nitrogen source DL-2-Aminobutyric (N) +3.9 +23.7 compare