Fitness data for PP_4111 in Pseudomonas putida KT2440

Elongation factor G 2
SEED: Translation elongation factor G
KEGG: elongation factor G

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source carbon source D-Glucose 55.5 mM -0.7 -3.2 compare
carbon source acetate (C) -0.6 -2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.6 -3.0 compare
nitrogen source NAG (N); with MOPS -0.6 -1.9 compare
pH pH 7 -0.5 -2.3 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 -2.4 compare
stress Growth with Chloride 500 mM -0.5 -2.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.5 -2.9 compare
pH Growth at pH6 and (C) D-Glucose -0.5 -1.8 compare
phage P. putida South MOI 0.1 -0.5 -2.4 compare
carbon source carbon source 4-vinylphenol 0.1 mM -0.5 -2.1 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.5 -2.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -0.5 -2.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.5 -2.2 compare
temperature Growth at 30C; with MOPS -0.5 -2.2 compare
phage PUT 8 MOI 1 -0.5 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +1.9 compare
phage P. putida Missley MOI 0.1 +0.5 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.6 +3.3 compare