Fitness data for PP_4107 in Pseudomonas putida KT2440

Transcriptional regulator, LysR family
SEED: Transcriptional regulator, LysR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
nitrogen source Propandiamine (N) -2.0 -4.3 compare
nitrogen source Propandiamine (N) -1.8 -3.6 compare
nitrogen source NAG (N); with MOPS -0.6 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -2.1 compare
carbon source DL-2-Aminoadipic 10 mM (C) -0.6 -3.4 compare
nitrogen source DL-2-Aminobutyric (N) -0.5 -3.8 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.5 -1.5 compare
phage PUT 8 MOI 1 -0.5 -1.6 compare
temperature Growth at 30C -0.5 -2.6 compare
phage P. putida Sci small MOI 0.1 -0.5 -1.5 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. +0.4 +2.2 compare
pH Growth at pH6 and (C) Trisodium citrate +0.4 +2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.5 +1.5 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +2.1 compare
stress Growth with Chloride 500 mM; with MOPS +0.5 +2.5 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +2.1 compare
phage P. putida Sci Big MOI 0.1 +0.6 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.6 +1.8 compare
carbon source L-Alanine (C) +1.3 +4.1 compare