Fitness data for PP_4094 in Pseudomonas putida KT2440

conserved protein of unknown function

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.4)


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group condition fitness t score  
pH Growth at pH6 and (C) D-Glucose -6.6 -2.2 compare
phage PUT 8 MOI 1 -6.1 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -4.3 -2.7 compare
stress R2A with Fusaric 480 ug/mL -3.1 -2.8 compare
carbon source carbon source 4-vinylphenol 0.01 mM -2.3 -2.2 compare
pH Growth at pH7 and (C) Trisodium citrate -2.1 -1.4 compare
carbon source 4-Methyl-2-oxopentanoic (C) -1.9 -2.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.9 -1.7 compare
carbon source carbon source 3-O-methyl-glucose 50 mM -1.6 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -1.6 -2.9 compare
carbon source 3-methyl-1-butanol 0.25 vol% (C) -1.5 -1.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.4 -0.7 compare
phage PUT8 MOI 10 +1.5 +3.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +1.5 +2.2 compare
phage PUT8 MOI 0.1 +1.6 +3.2 compare
phage P. putida Sci small MOI 0.1 +1.6 +2.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.7 +2.3 compare
nitrogen source Propandiamine (N) +1.8 +2.3 compare
phage P. putida Missley MOI 0.1 +2.1 +2.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +2.5 +2.2 compare