Fitness data for PP_4080 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: Uncharacterized protein ImpJ/VasE
KEGG: type VI secretion system protein ImpJ

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
phage P. putida Sci small MOI 0.1 -1.3 -3.0 compare
carbon source Valerolactone (C) -0.7 -2.2 compare
stress Growth with Chloride 200 mM -0.6 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.5 -2.4 compare
stress Growth with Chloride 500 mM; with MOPS -0.5 -2.0 compare
carbon source acetate (C) -0.4 -1.7 compare
carbon source Tween 20 (C) -0.4 -1.8 compare
carbon source rac-3-Hydroxypentanoic Acid (C) -0.4 -2.4 compare
pH D-Glucose (C) pH 6 -0.4 -2.2 compare
carbon source L-Leucine (C) +0.4 +2.0 compare
r2a control R2A control +0.4 +2.5 compare
carbon source carbon source 3-O-methyl-glucose 50 mM +0.4 +1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.4 +2.0 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 +2.2 compare
carbon source Valeric (C) +0.5 +2.1 compare
pH pH 8 +0.5 +2.5 compare
carbon source carbon source 4-vinylphenol 0.1 mM +0.5 +2.2 compare
carbon source carbon source D-Glucose 55.5 mM +0.5 +2.1 compare
pH pH 9 +0.5 +2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.6 +2.1 compare