Fitness data for PP_4057 in Pseudomonas putida KT2440

conserved membrane protein of unknown function with autotransporter beta-domain
SEED: outer membrane autotransporter

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
phage P. putida PUT 7 MOI 1 -1.6 -2.9 compare
pH Growth at pH6 and (C) D-Glucose -1.2 -1.3 compare
carbon source ferulate (C); with MOPS -1.1 -1.4 compare
stress R2A with Fusaric 240 ug/mL -1.1 -2.9 compare
pH Valerolactone (C) pH 6.5 -1.0 -1.9 compare
carbon source carbon source 2-Deoxy-D-glucose 100 mM -0.9 -3.0 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.9 -2.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.8 -2.5 compare
carbon source carbon source 3-O-methyl-glucose 50 mM -0.8 -2.2 compare
mixed community Putida_ML5X with Paraburkholderia sabiae T6SS mutant -0.8 -2.6 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.8 -1.8 compare
pH pH 9 -0.8 -1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.8 -3.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.7 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.7 -2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.7 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.6 compare
pH Growth at pH6 and (C) Trisodium citrate +0.8 +3.4 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v oleyl alcohol overlay +0.9 +2.5 compare
pH Growth at pH8 and (C) D-Glucose +0.9 +4.0 compare