Fitness data for PP_4048 in Pseudomonas putida KT2440

conserved protein of unknown function

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
nitrogen source D-2-Aminobutyric (N) -0.9 -3.9 compare
carbon source Valerolactone (C) -0.5 -2.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.5 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.5 -1.9 compare
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v dodecane overlay -0.4 -2.2 compare
carbon source Heptanoic (C) -0.4 -2.3 compare
stress R2A with Fusaric 480 ug/mL -0.4 -2.2 compare
carbon source D-Glucose (C) -0.4 -1.4 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.4 -1.4 compare
nitrogen source nitrate (N) -0.4 -1.7 compare
no phage control Time6-nophage -0.4 -2.3 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 +1.6 compare
carbon source acetate (C) +0.4 +1.4 compare
phage P. putida Sci small MOI 0.1 +0.4 +2.1 compare
pH Growth at pH9 and (C) Trisodium citrate +0.5 +2.2 compare
nitrogen source Urea (N) +0.5 +1.9 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 +1.6 compare
pH Growth at pH7 and (C) D-Glucose +0.6 +2.4 compare
pH Growth at pH8 and (C) Trisodium citrate +0.6 +3.2 compare
nitrogen source NAG (N); with MOPS +0.7 +3.0 compare