Fitness data for PP_4043 in Pseudomonas putida KT2440

putative 6-phosphogluconate dehydrogenase, decarboxylating
SEED: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)
KEGG: 6-phosphogluconate dehydrogenase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
micoeukaryotes Tetrahymena sp., Mixed culture-1 -0.8 -2.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.7 -2.4 compare
carbon source Delta-Nonalactone (C) -0.7 -2.7 compare
stress R2A with Fusaric 120 ug/mL -0.6 -2.9 compare
temperature Growth at 25C; with MOPS -0.6 -1.7 compare
carbon source L-Isoleucine (C) -0.6 -3.5 compare
carbon source L-Phenylalanine 5 mM (C) -0.6 -2.1 compare
phage P. putida South MOI 1 -0.6 -2.3 compare
stress Growth with Chloride 500 mM; with MOPS -0.6 -2.0 compare
carbon source Nonanoic (C) -0.5 -1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.5 -2.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.5 +1.5 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.6 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.6 +2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +2.2 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.6 +2.4 compare
nitrogen source Ammonium chloride (N) +0.6 +2.2 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.6 +4.0 compare
nitrogen source DL-2-Aminobutyric (N) +0.7 +4.0 compare
carbon source 3-methyl-1-butanol 0.1 vol% (C) +0.9 +3.4 compare