Fitness data for PP_4037 in Pseudomonas putida KT2440

NADP-dependent dihydropyrimidine dehydrogenase subunit
SEED: Pyridine nucleotide-disulphide oxidoreductase associated with reductive pyrimidine catabolism
KEGG: glutamate synthase (NADPH/NADH) small chain

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
nitrogen source Uracil (N) -3.3 -12.6 compare
nitrogen source Uracil (N) -3.1 -9.6 compare
nitrogen source 3-aminobutyric (N) -1.7 -10.9 compare
nitrogen source 3-aminobutyric (N) -1.5 -10.4 compare
nitrogen source Cytosine (N) -0.7 -4.6 compare
nitrogen source DL-3-Aminoisobutyric (N) -0.6 -3.8 compare
nitrogen source Cytosine (N) -0.6 -3.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.5 -2.0 compare
stress R2A with Fusaric 240 ug/mL -0.5 -2.0 compare
carbon source D-Glucose (C) -0.4 -1.8 compare
phage PUT 8 MOI 1 -0.4 -1.8 compare
phage P. putida Sci Big MOI 0.1 -0.4 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.8 compare
carbon source Delta-Undecalactone (C) +0.4 +2.9 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v dodecane overlay +0.5 +3.0 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v oleyl alcohol overlay +0.5 +2.8 compare
nitrogen source D-2-Aminobutyric (N) +0.5 +2.0 compare
no stress control Growth with no stress +0.5 +3.2 compare
carbon source D-Mannose (C) +0.6 +4.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.7 +3.2 compare