Fitness data for PP_4008 in Pseudomonas putida KT2440

ATP-dependent serine protease
SEED: ATP-dependent Clp protease ATP-binding subunit ClpA
KEGG: ATP-dependent Clp protease ATP-binding subunit ClpA

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 3.2)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -5.3 -8.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -5.1 -7.0 compare
carbon source Soil Extract with D-Glucose 10 mM; 30C; then outgrowth in LB -4.8 -3.3 compare
carbon source Soil Extract with D-Glucose 10 mM; 30C; then outgrowth in LB -4.8 -4.6 compare
micoeukaryotes Acanthamoeba sp., muxed culture-1 -4.4 -10.6 compare
carbon source M9 minimal media_noCarbon with Trisodium citrate 10 mM; 30C; then outgrowth in LB -4.3 -9.6 compare
carbon source Delta-Undecalactone (C) -4.0 -8.8 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 -3.9 -10.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -3.9 -10.0 compare
micoeukaryotes C.elegans, mixed culture-2 -3.7 -10.2 compare
carbon source 4-Hydroxyvalerate (C) (40mM) -3.7 -7.7 compare
carbon source Delta-Undecalactone (C) -3.7 -9.4 compare
micoeukaryotes C.elegans, mixed culture-1 -3.6 -9.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -3.6 -9.7 compare
micoeukaryotes Dictyostellum sp.mixed culture-1 -3.6 -9.9 compare
micoeukaryotes Dictyostellum sp.mixed culture-2 -3.5 -10.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -3.4 -6.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -3.4 -8.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -3.4 -9.4 compare
carbon source Delta-Decalactone (C) -3.2 -8.6 compare