Fitness data for PP_4002 in Pseudomonas putida KT2440

DNA-dependent ATPase required for recombination
SEED: FIG065221: Holliday junction DNA helicase
KEGG: putative ATPase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
stress Formaldehyde 0.03125 vol% -3.9 -10.2 compare
stress MOPS minimal media_Glucose20mM with Fluoroacetate 80 mM -1.1 -3.7 compare
nitrogen source nitrite (N) -1.0 -4.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.0 -3.1 compare
stress MOPS minimal media_Glucose20mM with Fluoroacetate 80 mM -0.9 -3.0 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.9 -2.5 compare
pH Growth at pH6 and (C) D-Glucose -0.9 -2.1 compare
carbon source Valeric (C) -0.8 -2.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.8 -4.1 compare
carbon source Tween 20 (C) -0.7 -2.1 compare
phage P. putida Missley MOI 0.1 -0.7 -2.0 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 -0.7 -2.7 compare
phage P. putida PUT10 MOI 10 +0.6 +3.3 compare
phage P. put South MOI 1 +0.6 +3.9 compare
phage P. putida South MOI 0.1 +0.7 +3.1 compare
phage P. put South MOI 1 +0.7 +4.0 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v oleyl alcohol overlay +0.7 +3.8 compare
temperature shift Temperature shift 30_to_25; with MOPS +0.8 +3.4 compare
phage P. putida PUT10 MOI 10 +0.8 +3.3 compare
phage P. putida South MOI 1 +0.9 +4.1 compare