Fitness data for PP_3962 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: Glycerate kinase (EC 2.7.1.31)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
pH Growth at pH6 and (C) Trisodium citrate -0.5 -2.2 compare
nitrogen source Ammonium chloride (N) -0.5 -2.2 compare
carbon source carbon source 4-vinylphenol 0.1 mM -0.4 -2.2 compare
pH pH 5 -0.4 -1.7 compare
carbon source carbon source 2-Deoxy-D-glucose 50 mM -0.4 -1.8 compare
carbon source carbon source Bisabolol 45 mM -0.4 -2.2 compare
nitrogen source 2,6-diaminopimelic (N) -0.4 -1.9 compare
stress R2A with Fusaric 240 ug/mL -0.4 -1.5 compare
pH pH 8 -0.4 -1.8 compare
carbon source carbon source 2-Deoxy-D-glucose 10 mM -0.4 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.4 -2.0 compare
temperature shift Temperature shift 10_to_34; with MOPS -0.4 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.4 +2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.4 +2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.5 +1.9 compare
temperature shift Temperature shift 30_to_34; with MOPS +0.5 +2.4 compare
nitrogen source nitrogen source nitrite 1mM +0.5 +2.4 compare
carbon source 3-methyl-1-butanol 0.25 vol% (C) +0.5 +2.9 compare
nitrogen source NAG (N); with MOPS +0.7 +3.0 compare