Fitness data for PP_3955 in Pseudomonas putida KT2440

permease
SEED: TRAP transporter, 4TM/12TM fusion protein, unknown substrate 1

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.3 -2.3 compare
carbon source L-Leucine (C) -0.3 -1.7 compare
carbon source L-Phenylalanine 5 mM (C) -0.3 -2.3 compare
pH Valerolactone (C) pH 6.5 -0.3 -2.1 compare
pH pH 9 -0.3 -1.9 compare
temperature Growth at 25C -0.3 -1.5 compare
nitrogen source Urea (N) -0.3 -1.5 compare
temperature Growth at 25C; with MOPS -0.3 -1.8 compare
dilutelb LB 0.1x with 55.5 mM D-Glucose -0.3 -2.0 compare
carbon source Valerolactone (C) -0.3 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs +0.3 +2.1 compare
mixed community Putida_ML5X with Paraburkholderia sabiae T6SS mutant +0.3 +2.0 compare
nitrogen source nitrogen source nitrate 20mM +0.3 +1.9 compare
no stress control Growth with no stress +0.3 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.3 +1.4 compare
pH Growth at pH6 and (C) Trisodium citrate +0.3 +1.9 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 +0.4 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.9 compare
stress R2A with Polymyxin B sulfate 0.001 mg/ml +0.4 +2.2 compare
carbon source Nonanoic (C) +0.4 +2.9 compare