Fitness data for PP_3946 in Pseudomonas putida KT2440

HTH-type transcriptional repressor NicR
SEED: Transcriptional regulator, MarR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 3.8)


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group condition fitness t score  
stress R2A with Fusaric 480 ug/mL -4.7 -2.3 compare
carbon source Trisodium citrate (C) -4.2 -1.3 compare
pH Growth at pH6 and (C) Trisodium citrate -4.2 -1.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -4.2 -2.2 compare
pH Growth at pH7 and (C) D-Glucose -4.2 -1.2 compare
nitrogen source nitrate (N) -4.1 -1.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -4.1 -1.1 compare
carbon source acetate (C) -4.1 -1.3 compare
pH Growth at pH9 and (C) D-Glucose -4.0 -2.1 compare
temperature shift Temperature shift 30_to_25 -4.0 -1.6 compare
carbon source D-Glucose (C) -4.0 -1.3 compare
temperature shift Temperature shift 30_to_25 -4.0 -1.4 compare
carbon source L-Lysine (C) -3.9 -1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -3.9 -1.1 compare
temperature shift Temperature shift 30_to_25; with MOPS -3.9 -1.5 compare
pH Growth at pH6 and (C) Trisodium citrate -3.9 -1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -3.9 -1.3 compare
carbon source ferulate (C); with MOPS -3.8 -1.2 compare
carbon source ferulate (C); with MOPS -3.8 -1.2 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -3.8 -2.0 compare