Fitness data for PP_3942 in Pseudomonas putida KT2440

maleate isomerase
SEED: Maleate cis-trans isomerase (EC 5.2.1.1)
KEGG: maleate isomerase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
nitrogen source Nicotinic Acid (N) -1.7 -6.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.5 -2.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -1.3 -2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -1.2 -1.9 compare
pH Growth at pH6 and (C) D-Glucose -1.2 -2.1 compare
pH pH 6 -1.1 -3.7 compare
nitrogen source Nicotinic Acid (N) -1.1 -4.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.9 -2.3 compare
nitrogen source 2,6-diaminopimelic (N) -0.9 -2.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.8 -2.8 compare
pH pH 5 -0.8 -2.3 compare
carbon source carbon source 4-vinylphenol 0.01 mM -0.7 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.7 -2.4 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.7 -1.9 compare
nitrogen source nitrate (N) +0.7 +2.0 compare
nitrogen source nitrogen source nitrite 0.5mM +0.7 +2.1 compare
temperature Growth at 30C; with MOPS +0.8 +1.8 compare
pH Growth at pH7 and (C) Trisodium citrate +0.9 +4.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +1.0 +2.4 compare
carbon source Valerolactone (C) +3.1 +2.1 compare