Fitness data for PP_3930 in Pseudomonas putida KT2440

conserved exported protein of unknown function
SEED: Glycine-rich cell wall structural protein precursor

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.2)


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group condition fitness t score  
pH Growth at pH6 and (C) D-Glucose -3.7 -2.5 compare
carbon source acetate (C) -2.8 -2.0 compare
nitrogen source NAG (N); with MOPS -2.4 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -2.3 -3.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -2.2 -1.8 compare
nitrogen source D-2-Aminobutyric (N) -2.0 -1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.8 -2.7 compare
phage P. putida PUT 7 MOI 1 -1.6 -1.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.6 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.5 -2.2 compare
pH Growth at pH6 and (C) Trisodium citrate -1.5 -2.0 compare
carbon source D-Glucose (C); with MOPS -1.5 -1.0 compare
carbon source carbon source 3-O-methyl-glucose 50 mM -1.5 -1.1 compare
phage P. putida Sci small MOI 0.1 -1.4 -1.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.4 -1.0 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.4 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -1.4 -1.9 compare
pH Growth at pH6 and (C) D-Glucose -1.2 -0.9 compare
carbon source Trisodium citrate 10 mM (C) -1.2 -2.2 compare
carbon source 1,3-Butandiol (C) -1.2 -2.0 compare