Fitness data for PP_3927 in Pseudomonas putida KT2440

Methyltransferase type 12
SEED: FIG00953695: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.9 -2.1 compare
carbon source ferulate (C); with MOPS -0.8 -2.3 compare
no stress control Growth with no stress -0.7 -1.8 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 -0.7 -2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.6 -2.3 compare
temperature shift Temperature shift 30_to_25 -0.5 -1.8 compare
temperature shift Temperature shift 30_to_25; with MOPS -0.5 -1.1 compare
stress R2A with Fusaric 240 ug/mL -0.5 -2.2 compare
nitrogen source nitrate (N) -0.5 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.5 -1.5 compare
nitrogen source nitrogen source nitrate 5mM -0.5 -1.2 compare
no stress control Growth with no stress +0.5 +2.0 compare
reactor_pregrowth Adaptation in M9 media timecourse 2; day 3 +0.5 +2.6 compare
temperature shift Temperature shift 30_to_10 +0.5 +2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.5 +1.6 compare
carbon source Trisodium citrate (C) +0.5 +2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.7 +1.8 compare
phage P. putida South MOI 10 +0.8 +3.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9 +2.6 compare