Fitness data for PP_3926 in Pseudomonas putida KT2440

short-chain dehydrogenase
SEED: Short-chain dehydrogenase/reductase SDR

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 2.0)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -4.4 -1.3 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels -4.3 -1.6 compare
carbon source Tween 20 (C) -4.3 -1.3 compare
nitrogen source nitrogen source nitrite 1mM -4.3 -1.5 compare
pH Growth at pH6 and (C) D-Glucose -4.0 -1.1 compare
pH Growth at pH8 and (C) D-Glucose -3.8 -1.7 compare
carbon source D-Glucose (C) -3.8 -1.3 compare
temperature shift Temperature shift 30_to_25 -3.8 -1.4 compare
carbon source Levulinic Acid (C) -3.0 -2.2 compare
carbon source Delta-Decalactone (C) -2.9 -1.6 compare
r2a control with 0.2% methanol R2A control with 0.2% methanol -2.9 -2.0 compare
phage P. putida Sci Big MOI 0.1 -2.6 -1.2 compare
carbon source ferulate (C); with MOPS -2.6 -1.1 compare
carbon source Delta-Undecalactone (C) -2.5 -2.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -2.4 -1.4 compare
reactor 24hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 1g/hr dextrose, set to 30% DO. -2.2 -1.5 compare
stress Growth with Chloride 500 mM; with MOPS -2.1 -1.5 compare
carbon source gluconate (C) -2.0 -1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -2.0 -1.8 compare
carbon source Delta-Nonalactone (C) -2.0 -1.8 compare