Fitness data for PP_3907 in Pseudomonas putida KT2440

conserved protein of unknown function

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
carbon source Tween 20 (C) -1.1 -2.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.8 -1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.8 -3.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.7 -2.7 compare
pH pH 6 -0.7 -2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.6 -2.2 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.6 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.6 -1.8 compare
stress Growth with Chloride 500 mM +0.6 +2.4 compare
phage P. putida PUT10 MOI 10 +0.6 +2.6 compare
phage P. put South MOI 1 +0.6 +2.9 compare
phage P. putida PUT10 MOI 10 +0.6 +2.5 compare
pH Growth at pH9 and (C) Trisodium citrate +0.6 +2.4 compare
phage P. putida South MOI 0.1 +0.6 +2.4 compare
temperature shift Temperature shift 10_to_30 +0.6 +2.2 compare
temperature shift Temperature shift 30_to_4 +0.7 +3.2 compare
carbon source D-Glucose (C) +0.8 +2.4 compare
pH Growth at pH7 and (C) Trisodium citrate +0.8 +2.6 compare
stress Geraniol 1 vol% +0.8 +3.7 compare
carbon source ferulate (C); with MOPS +0.9 +2.3 compare