Fitness data for PP_3903 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: FIG00966559: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 2.0)


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group condition fitness t score  
pH Growth at pH6 and (C) Trisodium citrate -5.1 -2.5 compare
carbon source D-Glucose (C) -5.1 -2.4 compare
carbon source Myristic (C) -4.4 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -3.7 -2.6 compare
carbon source L-Leucine (C) -3.4 -2.3 compare
phage P. putida Sci Big MOI 0.1 -2.9 -1.7 compare
nitrogen source NAG (N); with MOPS -2.7 -1.9 compare
stress TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 2500 uM; timepoint 1 -2.5 -2.6 compare
temperature shift Temperature shift 30_to_34; with MOPS -2.5 -2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -2.3 -3.4 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -2.3 -3.0 compare
anaerobic m9 anaerobic M9 -2.2 -2.0 compare
temperature Growth at 30C; with MOPS -2.2 -2.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -2.2 -2.7 compare
carbon source 3-methyl-1-butanol 0.25 vol% (C) -2.1 -1.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -2.0 -1.4 compare
carbon source L-tyrosine 5 mM (C) -2.0 -1.9 compare
temperature shift Temperature shift 30_to_25; with MOPS +2.0 +3.3 compare
temperature shift Temperature shift 30_to_10; with MOPS +2.0 +4.2 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +2.1 +3.3 compare