Fitness data for PP_3894 in Pseudomonas putida KT2440

putative Phage replication protein O
SEED: phage replication protein O, putative

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
micoeukaryotes Tetrahymena sp., Mixed culture-2 -0.7 -2.2 compare
phage P. putida Sci small MOI 0.1 -0.5 -1.5 compare
no stress control Growth with no stress -0.5 -2.2 compare
nitrogen source 2,6-diaminopimelic (N) -0.5 -1.9 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 -2.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -1.6 compare
carbon source 1,3-Butandiol (C) -0.5 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.5 -2.6 compare
temperature shift Temperature shift 10_to_30; with MOPS -0.4 -1.8 compare
carbon source Valeric (C) -0.4 -1.8 compare
phage P. putida PUT10 MOI 1 -0.4 -2.0 compare
phage P. putida PUT10 MOI 0.1 -0.4 -1.9 compare
temperature shift Temperature shift 30_to_25; with MOPS -0.4 -1.5 compare
stress MOPS minimal media_Glucose20mM with Fluoroacetate 80 mM -0.4 -2.2 compare
reactor 24hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 1g/hr dextrose, set to 30% DO. +0.4 +2.3 compare
carbon source carbon source 4-vinylphenol 0.01 mM +0.4 +1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.5 +2.0 compare
temperature shift Temperature shift 30_to_10 +0.5 +2.0 compare
temperature shift Temperature shift 30_to_10; with MOPS +0.6 +3.0 compare
temperature shift Temperature shift 30_to_10; with MOPS +0.7 +2.7 compare