Fitness data for PP_3892 in Pseudomonas putida KT2440

conserved protein of unknown function

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.8)


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group condition fitness t score  
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -3.1 -1.7 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -2.9 -1.6 compare
carbon source D-Glucose (C); with MOPS -2.8 -1.4 compare
pH Growth at pH9 and (C) Trisodium citrate -2.6 -1.2 compare
pH Growth at pH6 and (C) D-Glucose -2.5 -1.2 compare
carbon source D-Glucose (C) with 20AA_mix_minus_Met -2.3 -2.2 compare
pH pH 8 -2.3 -0.9 compare
pH D-Glucose (C) pH 6 -2.2 -1.1 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Phenylalanine 5 mM -2.1 -2.1 compare
stress MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL -2.0 -1.1 compare
temperature Growth at 25C; with MOPS -2.0 -1.6 compare
phage P. putida Missley MOI 0.1 -1.9 -1.1 compare
stress MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL -1.9 -1.1 compare
stress MOPS minimal media_Glucose20mM with PHB-HV-HH 0.1 mg/mL -1.9 -1.2 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 -1.8 -1.0 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM -1.8 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.8 -1.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +1.8 +2.3 compare
nitrogen source nitrogen source nitrite 1mM +1.8 +2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +2.0 +3.2 compare