Fitness data for PP_3884 in Pseudomonas putida KT2440

Phage holin, lambda family
SEED: phage holin, lambda family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
nitrogen source NAG (N); with MOPS -2.2 -2.9 compare
temperature shift Temperature shift 30_to_25 -1.7 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.3 -2.4 compare
no stress control Growth with no stress -1.2 -1.9 compare
carbon source D-Glucose (C) -1.2 -1.5 compare
nitrogen source 3,5-Dinitrosalicylic (N) -1.2 -3.1 compare
carbon source Valeric (C) -1.1 -2.3 compare
microaerobic m9 microaerobic M9 -1.1 -2.6 compare
temperature shift Temperature shift 10_to_25; with MOPS -1.1 -2.8 compare
temperature shift Temperature shift 30_to_25; with MOPS -1.1 -1.0 compare
pH Growth at pH6 and (C) D-Glucose -1.0 -3.1 compare
carbon source L-Proline (C) -1.0 -1.7 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM -1.0 -2.3 compare
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v dodecane overlay -1.0 -2.2 compare
phage P. putida Sci Big MOI 0.1 -0.9 -1.1 compare
temperature Growth at 25C; with MOPS -0.9 -1.7 compare
pH Growth at pH6 and (C) Trisodium citrate +0.9 +2.6 compare
pH pH 6 +0.9 +2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +1.0 +1.3 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +3.0 +1.3 compare