Fitness data for PP_3881 in Pseudomonas putida KT2440

putative Phage terminase, large subunit
SEED: Phage terminase, large subunit

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
phage P. putida Sci small MOI 0.1 -0.6 -2.4 compare
phage PUT 8 MOI 1 -0.4 -1.6 compare
pH Growth at pH6 and (C) D-Glucose -0.3 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.3 -1.9 compare
temperature shift Temperature shift 10_to_25; with MOPS -0.3 -1.6 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.3 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.3 -1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.3 -1.9 compare
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.3 -1.8 compare
nitrogen source nitrogen source Ammonium chloride 20mM +0.3 +1.6 compare
carbon source butyrate (C) +0.3 +2.0 compare
stress Formaldehyde 0.03125 vol% +0.3 +2.3 compare
temperature shift Temperature shift 10_to_25; with MOPS +0.3 +1.6 compare
temperature shift Temperature shift 30_to_34; with MOPS +0.3 +1.9 compare
temperature shift Temperature shift 10_to_34; with MOPS +0.3 +2.2 compare
pH Growth at pH9 and (C) Trisodium citrate +0.3 +1.8 compare
no stress control Growth with no stress +0.3 +1.9 compare
phage P. putida Sci small MOI 0.1 +0.3 +1.5 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.8 compare
stress Growth with Chloride 500 mM; with MOPS +0.4 +2.4 compare