Fitness data for PP_3871 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: FIG111678: IS, phage, Tn; Transposon-related functions

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
pH Growth at pH6 and (C) Trisodium citrate -1.1 -2.0 compare
stress Growth with Chloride 500 mM; with MOPS -0.7 -1.5 compare
pH D-Glucose (C) pH 6.5 -0.7 -2.5 compare
nitrogen source NAG (N); with MOPS -0.7 -1.4 compare
temperature Growth at 30C; with MOPS -0.7 -1.1 compare
stress MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL -0.6 -2.4 compare
pH Growth at pH9 and (C) D-Glucose -0.6 -2.9 compare
stress Growth with Chloride 500 mM -0.6 -2.2 compare
carbon source p-Coumaric (C) -0.6 -3.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.6 -1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.6 -1.6 compare
time series Timeseries; MIN condition; Bioreplicate 1; Time 7hrs; Measurement -0.6 -2.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.6 +1.6 compare
pH Growth at pH7 and (C) Trisodium citrate +0.6 +1.5 compare
temperature Growth at 30C; with MOPS +0.6 +2.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.6 +1.8 compare
carbon source D-Glucose (C) with 20AA_mix_minus_His +0.6 +3.3 compare
carbon source L-Lysine (C) +0.6 +1.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.2 +2.5 compare