Fitness data for PP_3854 in Pseudomonas putida KT2440

Lysozyme
SEED: Phage lysin

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
pH Valerolactone (C) pH 6.5 -0.9 -3.3 compare
carbon source carbon source D-Glucose 55.5 mM -0.7 -2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.7 -2.5 compare
carbon source Myristic (C) -0.6 -1.6 compare
carbon source Tween 20 (C) -0.6 -1.7 compare
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.5 -2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.5 -1.2 compare
carbon source Delta-Decalactone (C) -0.5 -2.3 compare
nitrogen source 2,6-diaminopimelic (N) +0.5 +1.8 compare
nitrogen source D-2-Aminobutyric (N) +0.5 +1.6 compare
phage P. putida Sci Big MOI 0.1 +0.5 +2.1 compare
nitrogen source nitrate (N) +0.6 +2.3 compare
nitrogen source nitrate (N) +0.6 +1.9 compare
stress Growth with Chloride 500 mM; with MOPS +0.6 +2.7 compare
temperature Growth at 30C; with MOPS +0.6 +2.1 compare
temperature Growth at 25C; with MOPS +0.6 +2.4 compare
pH Growth at pH9 and (C) Trisodium citrate +0.6 +1.7 compare
r2a control with 0.2% methanol R2A control with 0.2% methanol +0.6 +3.5 compare
phage P. putida Sci small MOI 0.1 +0.7 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.1 +1.8 compare