Fitness data for PP_3852 in Pseudomonas putida KT2440

conserved protein of unknown function with BNR domain
SEED: Sialidase (EC 3.2.1.18)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
pH Growth at pH7 and (C) D-Glucose -0.6 -3.1 compare
temperature Growth at 25C; with MOPS -0.4 -2.3 compare
nitrogen source NAG (N); with MOPS -0.4 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.3 -1.5 compare
stress R2A with Fusaric 480 ug/mL -0.3 -2.1 compare
pH Valerolactone (C) pH 6.5 +0.3 +2.1 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO. +0.3 +2.2 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. +0.3 +2.2 compare
phage P. putida Sci small MOI 0.1 +0.3 +1.6 compare
phage PUT8 MOI 0.1 +0.3 +2.1 compare
phage P. putida Sci small MOI 0.1 +0.3 +1.7 compare
carbon source 1,4-Butanediol (C) +0.3 +2.7 compare
carbon source 1,4-Butanediol (C) +0.3 +2.9 compare
nitrogen source nitrogen source Ammonium chloride 20mM +0.3 +2.3 compare
nitrogen source nitrogen source nitrite 1mM +0.3 +2.0 compare
phage PUT8 MOI 10 +0.3 +2.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.3 +1.7 compare
carbon source Valerolactone (C) +0.3 +2.2 compare
stress Formaldehyde 0.03125 vol% +0.4 +3.1 compare
nitrogen source D-2-Aminobutyric (N) +0.5 +2.5 compare