Fitness data for PP_3818 in Pseudomonas putida KT2440

Periplamic phosphate-binding protein
SEED: Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1)
KEGG: phosphate transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
no stress control Growth with no stress -1.0 -2.5 compare
carbon source ferulate (C); with MOPS -1.0 -2.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.9 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.8 -2.4 compare
nitrogen source Urea (N) -0.8 -2.4 compare
phage P. putida Sci Big MOI 0.1 -0.7 -2.3 compare
temperature shift Temperature shift 10_to_25; with MOPS -0.6 -2.7 compare
carbon source ferulate (C); with MOPS -0.6 -1.9 compare
stress Growth with Chloride 200 mM -0.6 -2.1 compare
stress R2A with Fusaric 240 ug/mL -0.6 -2.1 compare
stress Growth with Chloride 500 mM -0.5 -3.0 compare
nitrogen source nitrogen source nitrate 5mM -0.5 -2.2 compare
nitrogen source nitrogen source nitrite 0.5mM -0.5 -2.2 compare
pH Growth at pH7 and (C) D-Glucose -0.5 -1.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.5 -2.2 compare
temperature shift Temperature shift 30_to_21; with MOPS +0.5 +3.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.5 +2.0 compare
pH Growth at pH6 and (C) D-Glucose +0.5 +1.9 compare
r2a control R2A control +0.5 +2.7 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.0 +2.0 compare