Fitness data for PP_3781 in Pseudomonas putida KT2440

Oxygen-independent Coproporphyrinogen III oxidase family protein
SEED: Hypothetical radical SAM family enzyme, NOT coproporphyrinogen III oxidase, oxygen-independent

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


Add gene:

Or see all 989 experiments or choose conditions

group condition fitness t score  
carbon source ferulate (C); with MOPS -0.5 -2.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.5 -2.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -2.7 compare
pH Growth at pH6 and (C) D-Glucose -0.4 -1.9 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 -0.4 -1.7 compare
carbon source D-Lysine 10 mM (C) -0.4 -2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.4 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.3 -1.7 compare
carbon source carbon source 2-Deoxy-D-glucose 10 mM +0.4 +2.0 compare
nitrogen source nitrogen source nitrate 5mM +0.4 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4 +1.9 compare
stress MOPS minimal media_Glucose20mM with Fluoroacetate 80 mM +0.4 +2.8 compare
nitrogen source D-2-Aminobutyric (N) +0.4 +2.0 compare
pH pH 7 +0.4 +2.3 compare
pH pH 5 +0.5 +2.3 compare
pH pH 8 +0.5 +2.5 compare
carbon source carbon source 2-Deoxy-D-glucose 50 mM +0.5 +2.6 compare
pH pH 9 +0.5 +3.0 compare
pH pH 6 +0.6 +2.9 compare
phage P. putida Sci small MOI 0.1 +0.6 +2.9 compare