Fitness data for PP_3763 in Pseudomonas putida KT2440

putative CobF protein
SEED: Precorrin-6A synthase (EC 2.1.1.152)
KEGG: precorrin-6A synthase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
phage P. putida Sci small MOI 0.1 -2.5 -3.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.5 -3.6 compare
carbon source ferulate (C); with MOPS -1.3 -2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.9 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.9 -2.4 compare
pH Growth at pH6 and (C) Trisodium citrate -0.9 -1.7 compare
phage P. putida PUT 7 MOI 1 -0.8 -2.0 compare
nitrogen source nitrogen source nitrite 1mM -0.7 -1.8 compare
reactor 40hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 2.15g/hr dextrose, set to 30% DO. -0.7 -2.4 compare
nitrogen source Urea (N) -0.7 -1.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.6 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.6 -1.0 compare
temperature shift Temperature shift 30_to_25 +0.6 +2.7 compare
pH pH 7 +0.6 +1.4 compare
pH pH 5 +0.7 +2.1 compare
carbon source carbon source Glycerol 108.6 mM +0.7 +2.0 compare
pH Growth at pH7 and (C) Trisodium citrate +0.7 +1.7 compare
carbon source carbon source Bisabolol 45 mM +0.8 +2.2 compare
carbon source carbon source 4-vinylphenol 0.01 mM +0.8 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.4 +1.2 compare