Fitness data for PP_3743 in Pseudomonas putida KT2440

conserved exported protein of unknown function
SEED: Ribonucleotide reductase, alpha subunit

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
phage PUT8 MOI 0.1 -1.1 -3.2 compare
nitrogen source NAG (N); with MOPS -0.9 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.9 -3.3 compare
phage P. putida Missley MOI 0.1 -0.7 -1.7 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM -0.7 -2.2 compare
pH Growth at pH6 and (C) Trisodium citrate -0.7 -1.3 compare
reactor 24hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 1g/hr dextrose, set to 30% DO. -0.7 -2.3 compare
phage P. putida PUT 7 MOI 1 -0.6 -2.0 compare
stress Growth with Chloride 500 mM; with MOPS -0.6 -2.7 compare
temperature shift Temperature shift 30_to_10; with MOPS +0.6 +2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.6 +0.8 compare
carbon source Vanillic Acid (C) +0.7 +2.8 compare
pH pH 5 +0.7 +2.3 compare
carbon source carbon source D-Glucose 55.5 mM +0.7 +1.9 compare
carbon source carbon source 2-Deoxy-D-glucose 10 mM +0.7 +2.1 compare
carbon source carbon source Glycerol 108.6 mM +0.8 +2.3 compare
carbon source carbon source 2-Deoxy-D-glucose 100 mM +0.8 +2.4 compare
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM +0.8 +2.2 compare
pH pH 7 +0.8 +2.2 compare
carbon source carbon source 4-vinylphenol 0.1 mM +1.0 +2.4 compare