Fitness data for PP_3729 in Pseudomonas putida KT2440

Periplasmic amino acid-binding protein-related protein
SEED: FIG00956444: hypothetical protein
KEGG: polar amino acid transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
carbon source Myristic (C) -1.8 -2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.8 -3.9 compare
carbon source L-Arginine (C) -1.5 -5.1 compare
phage P. putida Sci small MOI 0.1 -1.3 -1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -1.2 -2.0 compare
carbon source L-Lysine (C) -1.0 -2.3 compare
carbon source L-Lysine (C) -0.9 -3.9 compare
pH Growth at pH6 and (C) D-Glucose -0.9 -1.2 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.8 -1.5 compare
carbon source L-Lysine (C) -0.7 -3.8 compare
carbon source 2-Methylbutanoic (C) -0.7 -2.5 compare
r2a control R2A control -0.7 -3.0 compare
time series Timeseries; NC condition; Bioreplicate 1; Time 5hrs; Measurement -0.7 -2.8 compare
carbon source Valeric (C) -0.7 -1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.7 -1.4 compare
nitrogen source Propiolactam (N) -0.7 -2.1 compare
pH pH 4 -0.7 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs +0.8 +2.8 compare
no stress control Growth with no stress +0.8 +1.9 compare
carbon source D-Glucose (C) +1.0 +2.6 compare