Fitness data for PP_3724 in Pseudomonas putida KT2440

putative Acyl-CoA synthetase
SEED: Acetyl-CoA synthetase (ADP-forming) alpha and beta chains, putative

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source ferulate (C); with MOPS -0.9 -3.5 compare
carbon source L-Arginine (C) -0.7 -3.6 compare
phage P. putida Missley MOI 0.1 -0.6 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.6 -2.7 compare
temperature shift Temperature shift 30_to_21; with MOPS -0.6 -2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.5 -1.7 compare
carbon source L-Leucine (C) -0.5 -2.5 compare
no stress control Growth with no stress -0.5 -1.5 compare
nitrogen source nitrogen source nitrite 0.5mM -0.5 -1.6 compare
nitrogen source nitrogen source Ammonium chloride 20mM -0.5 -1.8 compare
micoeukaryotes C.elegans, mixed culture-2 +0.5 +2.1 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO. +0.5 +2.5 compare
micoeukaryotes C.elegans, mixed culture-1 +0.5 +2.6 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. +0.5 +2.8 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.6 +2.5 compare
micoeukaryotes Dictyostellum sp.mixed culture-1 +0.6 +2.8 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 +0.6 +2.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.9 compare
micoeukaryotes Dictyostellum sp.mixed culture-2 +0.7 +3.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.7 +2.2 compare