Fitness data for PP_3722 in Pseudomonas putida KT2440

Alanine racemase
SEED: Alanine racemase (EC 5.1.1.1)
KEGG: alanine racemase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
phage P. putida Sci Big MOI 0.1 -1.1 -2.9 compare
carbon source L-Arginine (C) -1.0 -4.9 compare
phage P. putida Missley MOI 0.1 -0.8 -2.4 compare
stress Butanol 0.6 vol% -0.6 -3.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.5 -2.8 compare
carbon source Soil Extract with D-Glucose 10 mM; 30C; then outgrowth in LB -0.5 -3.4 compare
phage P. putida compost MOI 0.1 -0.5 -2.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.5 -1.3 compare
nitrogen source Ammonium chloride (N) +0.5 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.5 +2.7 compare
temperature shift Temperature shift 30_to_21; with MOPS +0.5 +1.9 compare
pH Growth at pH7 and (C) D-Glucose +0.6 +2.7 compare
temperature shift Temperature shift 10_to_30; with MOPS +0.6 +2.8 compare
nitrogen source nitrate (N) +0.7 +2.9 compare
pH Growth at pH6 and (C) Trisodium citrate +0.8 +3.7 compare
micoeukaryotes Dictyostellum sp.mixed culture-2 +0.9 +2.7 compare
micoeukaryotes Dictyostellum sp.mixed culture-1 +1.0 +3.8 compare
micoeukaryotes C.elegans, mixed culture-1 +1.1 +3.4 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 +1.1 +3.7 compare
micoeukaryotes C.elegans, mixed culture-2 +1.4 +4.0 compare