Fitness data for PP_3719 in Pseudomonas putida KT2440

Putrescine-binding periplasmic protein
SEED: Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.5 -2.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.5 -2.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.5 -2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.4 -2.4 compare
phage P. putida Missley MOI 0.1 -0.4 -2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.4 -2.4 compare
temperature Growth at 25C -0.4 -1.8 compare
stress R2A with Fusaric 240 ug/mL -0.4 -2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.3 -1.6 compare
stress Growth with Chloride 500 mM; with MOPS -0.3 -2.0 compare
pH Growth at pH7 and (C) Trisodium citrate +0.3 +1.6 compare
carbon source ferulate (C); with MOPS +0.3 +1.8 compare
carbon source carbon source 3-O-methyl-glucose 50 mM +0.3 +1.6 compare
carbon source carbon source 2-Deoxy-D-glucose 50 mM +0.3 +2.0 compare
phage P. putida South MOI 10 +0.4 +1.9 compare
nitrogen source Propandiamine (N) +0.4 +2.3 compare
pH pH 9 +0.4 +1.8 compare
carbon source carbon source 4-vinylphenol 0.01 mM +0.4 +1.9 compare
carbon source Valeric (C) +0.4 +2.3 compare
pH pH 5 +0.5 +2.6 compare