Fitness data for PP_3680 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: putative exonuclease
KEGG: putative ATP-dependent endonuclease of the OLD family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
carbon source carbon source D-Glucose 55.5 mM -0.4 -2.5 compare
pH Valerolactone (C) pH 6.5 -0.3 -2.3 compare
carbon source acetate (C) -0.3 -1.9 compare
pH Growth at pH8 and (C) Trisodium citrate -0.3 -2.1 compare
carbon source carbon source Bisabolene 48.9 mM -0.3 -2.0 compare
pH Growth at pH6 and (C) D-Glucose -0.3 -1.5 compare
pH pH 4 -0.2 -1.9 compare
phage P. put South MOI 0.1 +0.2 +2.1 compare
temperature shift Temperature shift 10_to_30; with MOPS +0.3 +2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.3 +1.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.3 +1.8 compare
phage P. putida compost MOI 0.1 +0.3 +2.7 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.3 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.3 +2.3 compare
nitrogen source 2,6-diaminopimelic (N) +0.4 +2.8 compare
phage P. putida Missley MOI 0.1 +1.4 +10.8 compare
phage P. putida PUT 7 MOI 1 +1.4 +11.3 compare
phage P. putida Sci Big MOI 0.1 +1.7 +13.9 compare
phage P. putida Sci small MOI 0.1 +1.9 +14.6 compare
phage P. putida Sci small MOI 0.1 +1.9 +14.7 compare